Zm00001e023274_P001

Description : subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000448 (LandPlants) Phylogenetic Tree(s): OG_05_0000448_tree ,
OG_06_0009042 (SeedPlants) Phylogenetic Tree(s): OG_06_0009042_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e023274_P001
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00045p00108620	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00048p00046670	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00055p00102180	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.1	Archaeplastida
AMTR_s00056p00132920	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
AT1G02530	PGP12	P-glycoprotein 12	0.04	Archaeplastida
AT1G27940	PGP13	P-glycoprotein 13	0.05	Archaeplastida
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.03	Archaeplastida
AT3G28360	PGP16	P-glycoprotein 16	0.03	Archaeplastida
AT3G28380	PGP17	P-glycoprotein 17	0.04	Archaeplastida
AT3G55320	PGP20	P-glycoprotein 20	0.02	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.04	Archaeplastida
AT4G18050	PGP9	P-glycoprotein 9	0.03	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.09	Archaeplastida
AT5G46540	PGP7	P-glycoprotein 7	0.05	Archaeplastida
Cre17.g725150	No alias	ABC transporter B family member 7 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01009946001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
GSVIVT01013125001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01015306001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01021365001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01028256001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_08616	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_13906	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_13908	No alias	ABC transporter B family member 10 OS=Arabidopsis...	0.06	Archaeplastida
Gb_23626	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_27347	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Gb_32125	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_36503	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g50160.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.1	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.05	Archaeplastida
LOC_Os05g47500.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os08g45030.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_126766g0010	No alias	subfamily ABCB transporter	0.1	Archaeplastida
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.09	Archaeplastida
Mp2g06270.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.05	Archaeplastida
Pp3c1_7210V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c21_18190V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c9_13390V3.1	No alias	P-glycoprotein 6	0.04	Archaeplastida
Smo123915	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo148837	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo230688	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo233433	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo99885	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc02g087410.4.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc02g087870.3.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Archaeplastida
Solyc03g005860.4.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Solyc03g122070.3.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc06g009290.4.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc08g076720.4.1	No alias	subfamily ABCB transporter	0.12	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e017444_P002	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Zm00001e020073_P001	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Zm00001e025063_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e040247_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e041008_P003	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016872	intramolecular lyase activity	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	52	318
IPR011527	ABC1_TM_dom	692	962
IPR003439	ABC_transporter-like	388	537
IPR003439	ABC_transporter-like	1028	1176

External Links

No external refs found!

Zm00001e023274_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation