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  5. Zm00001e024001_P001

Zm00001e024001_P001


Description : no hits & (original description: none)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0064047 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024001_P001
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00102760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
AT1G22985 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.08 Archaeplastida
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT3G11020 DREB2B, DREB2 DRE/CRT-binding protein 2B 0.01 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
AT5G19790 RAP2.11 related to AP2 11 0.01 Archaeplastida
AT5G25190 No alias Integrase-type DNA-binding superfamily protein 0.01 Archaeplastida
GSVIVT01005747001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01031387001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
LOC_Os02g06330.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g09650.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g08500.2 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g52090.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g41780.1 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os06g47590.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_9905g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Pp3c4_2660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_2680V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Solyc05g052050.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e007352_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e030279_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.06 Archaeplastida
Zm00001e033965_P001 No alias transcription factor (DREB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 63 113
No external refs found!