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  5. Zm00001e024163_P002

Zm00001e024163_P002


Description : cationic amino acid transporter (CAT)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0002054 (LandPlants) Phylogenetic Tree(s): OG_05_0002054_tree ,
OG_06_0001934 (SeedPlants) Phylogenetic Tree(s): OG_06_0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024163_P002
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AT4G21120 AAT1, CAT1 amino acid transporter 1 0.03 Archaeplastida
LOC_Os01g11160.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
LOC_Os11g05690.2 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
MA_10433658g0020 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Pp3c5_24930V3.1 No alias cationic amino acid transporter 6 0.02 Archaeplastida
Zm00001e005030_P001 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Zm00001e016491_P001 No alias cationic amino acid transporter (CAT) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR029485 CAT_C 524 574
IPR002293 AA/rel_permease1 67 493
No external refs found!