Zm00001e024268_P001


Description : transcription factor (HSF)


Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0000104 (SeedPlants) Phylogenetic Tree(s): OG_06_0000104_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024268_P001
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 Archaeplastida
AMTR_s00040p00209530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
AMTR_s00132p00118400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
AT2G26150 HSFA2, ATHSFA2 heat shock transcription factor A2 0.14 Archaeplastida
AT3G51910 AT-HSFA7A, HSFA7A heat shock transcription factor A7A 0.08 Archaeplastida
AT3G63350 HSFA7B, AT-HSFA7B winged-helix DNA-binding transcription factor family protein 0.09 Archaeplastida
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.04 Archaeplastida
AT5G03720 HSFA3, AT-HSFA3 heat shock transcription factor A3 0.03 Archaeplastida
AT5G62020 AT-HSFB2A, HSFB2A heat shock transcription factor B2A 0.02 Archaeplastida
Cre07.g354500 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
GSVIVT01003118001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.08 Archaeplastida
GSVIVT01010595001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
GSVIVT01019829001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
GSVIVT01033781001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
GSVIVT01035385001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.07 Archaeplastida
Gb_00558 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 Archaeplastida
Gb_11758 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.07 Archaeplastida
Gb_14573 No alias transcription factor (HSF) 0.02 Archaeplastida
Gb_16343 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 Archaeplastida
Gb_19891 No alias transcription factor (HSF) 0.05 Archaeplastida
LOC_Os01g43590.1 No alias transcription factor (HSF) 0.02 Archaeplastida
LOC_Os02g13800.1 No alias transcription factor (HSF) 0.02 Archaeplastida
LOC_Os03g25120.1 No alias transcription factor (HSF) 0.01 Archaeplastida
LOC_Os03g53340.2 No alias transcription factor (HSF) 0.1 Archaeplastida
LOC_Os04g48030.1 No alias transcription factor (HSF) 0.11 Archaeplastida
LOC_Os06g36930.1 No alias transcription factor (HSF) 0.1 Archaeplastida
LOC_Os08g43334.1 No alias transcription factor (HSF) 0.06 Archaeplastida
LOC_Os09g35790.1 No alias transcription factor (HSF) 0.07 Archaeplastida
LOC_Os10g28340.1 No alias transcription factor (HSF) 0.12 Archaeplastida
MA_124940g0010 No alias transcription factor (HSF) 0.02 Archaeplastida
Pp3c1_32480V3.1 No alias heat shock factor 3 0.02 Archaeplastida
Smo107503 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.08 Archaeplastida
Solyc04g078770.4.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Solyc08g076590.3.1 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 Archaeplastida
Solyc08g080540.3.1 No alias transcription factor (HSF) 0.04 Archaeplastida
Solyc09g065660.4.1 No alias transcription factor (HSF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 37 126
No external refs found!