Zm00001e024352_P003

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0013076 (LandPlants) Phylogenetic Tree(s): OG_05_0013076_tree ,
OG_06_0004252 (SeedPlants) Phylogenetic Tree(s): OG_06_0004252_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e024352_P003
Cluster	HCCA: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00016380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00053p00216880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AT1G55600	ATWRKY10, MINI3, WRKY10	WRKY DNA-binding protein 10	0.02	Archaeplastida
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.03	Archaeplastida
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.02	Archaeplastida
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.03	Archaeplastida
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.03	Archaeplastida
GSVIVT01007006001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01021397001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01022259001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01033195001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01035884001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_16513	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_26894	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g18584.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g51690.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os03g20550.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os04g50920.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g50700.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os08g29660.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_11072g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_126273g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_88419g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_88437g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c20_12200V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c3_21440V3.1	No alias	WRKY family transcription factor	0.03	Archaeplastida
Solyc02g072190.4.1	No alias	No annotation	0.02	Archaeplastida
Solyc02g094270.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc05g007110.2.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc05g015850.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc07g056280.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc09g066010.3.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Solyc10g007970.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e002502_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e005078_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e007070_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e015531_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e016623_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020229_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027140_P002	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Zm00001e028011_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006528	asparagine metabolic process	IEP	Neighborhood
BP	GO:0006529	asparagine biosynthetic process	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009584	detection of visible light	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
BP	GO:0018298	protein-chromophore linkage	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0051606	detection of stimulus	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	537	576
IPR003657	WRKY_dom	486	507
IPR003657	WRKY_dom	277	333

External Links

No external refs found!

Zm00001e024352_P003

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation