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  5. AT3G28500

AT3G28500


Description : 60S acidic ribosomal protein family


Gene families : OG0001112 (Archaeplastida) Phylogenetic Tree(s): OG0001112_tree ,
OG_05_0001212 (LandPlants) Phylogenetic Tree(s): OG_05_0001212_tree ,
OG_06_0001391 (SeedPlants) Phylogenetic Tree(s): OG_06_0001391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28500
Cluster HCCA: Cluster_164


Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005840 ribosome ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006414 translational elongation ISS Interproscan
CC GO:0022626 cytosolic ribosome IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000418 RNA polymerase IV complex IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003727 single-stranded RNA binding IEP Neighborhood
MF GO:0003979 UDP-glucose 6-dehydrogenase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006065 UDP-glucuronate biosynthetic process IEP Neighborhood
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Neighborhood
BP GO:0006638 neutral lipid metabolic process IEP Neighborhood
BP GO:0006639 acylglycerol metabolic process IEP Neighborhood
BP GO:0006641 triglyceride metabolic process IEP Neighborhood
BP GO:0007005 mitochondrion organization IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0009225 nucleotide-sugar metabolic process IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010866 regulation of triglyceride biosynthetic process IEP Neighborhood
BP GO:0010867 positive regulation of triglyceride biosynthetic process IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0034196 acylglycerol transport IEP Neighborhood
BP GO:0034197 triglyceride transport IEP Neighborhood
BP GO:0034599 cellular response to oxidative stress IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
CC GO:0042645 mitochondrial nucleoid IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0045834 positive regulation of lipid metabolic process IEP Neighborhood
BP GO:0046398 UDP-glucuronate metabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
MF GO:0047617 acyl-CoA hydrolase activity IEP Neighborhood
BP GO:0048317 seed morphogenesis IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048832 specification of plant organ number IEP Neighborhood
BP GO:0048833 specification of floral organ number IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051131 chaperone-mediated protein complex assembly IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070407 oxidation-dependent protein catabolic process IEP Neighborhood
BP GO:0090207 regulation of triglyceride metabolic process IEP Neighborhood
BP GO:0090208 positive regulation of triglyceride metabolic process IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000032 regulation of secondary shoot formation IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!