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  5. Zm00001e024685_P001

Zm00001e024685_P001


Description : E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana (sp|q9lt17|bbr_arath : 175.0)


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0001074 (LandPlants) Phylogenetic Tree(s): OG_05_0001074_tree ,
OG_06_0000731 (SeedPlants) Phylogenetic Tree(s): OG_06_0000731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024685_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00239960 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G17970 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00000319.12 No alias No description available 0.01 Archaeplastida
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01036994001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os05g47670.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
LOC_Os06g03580.2 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g14320.1 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c22_1990V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc12g010500.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 336 377
No external refs found!