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  5. Zm00001e024861_P001

Zm00001e024861_P001


Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0000330 (LandPlants) Phylogenetic Tree(s): OG_05_0000330_tree ,
OG_06_0000655 (SeedPlants) Phylogenetic Tree(s): OG_06_0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024861_P001
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.05 Archaeplastida
AT1G73150 GTE3 global transcription factor group E3 0.03 Archaeplastida
AT3G01770 ATBET10, BET10 bromodomain and extraterminal domain protein 10 0.03 Archaeplastida
AT3G52280 GTE6 general transcription factor group E6 0.03 Archaeplastida
AT5G65630 GTE7 global transcription factor group E7 0.04 Archaeplastida
Cpa|evm.model.tig00000632.12 No alias No description available 0.02 Archaeplastida
GSVIVT01016315001 No alias Transcription factor GTE6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Gb_04915 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
LOC_Os02g15220.2 No alias transcriptional co-activator (BET/GTE) 0.07 Archaeplastida
LOC_Os02g38980.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os08g03360.1 No alias Transcription factor GTE9 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_10429630g0020 No alias Transcription factor GTE10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435152g0020 No alias transcriptional co-activator (BET/GTE) 0.05 Archaeplastida
MA_15819g0010 No alias Transcription factor GTE1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Smo83947 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g091660.3.1 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Solyc12g014170.2.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR027353 NET_dom 491 552
IPR001487 Bromodomain 325 407
No external refs found!