Zm00001e025053_P001

Description : protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)

Gene families : OG0001523 (Archaeplastida) Phylogenetic Tree(s): OG0001523_tree ,
OG_05_0000985 (LandPlants) Phylogenetic Tree(s): OG_05_0000985_tree ,
OG_06_0001825 (SeedPlants) Phylogenetic Tree(s): OG_06_0001825_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e025053_P001
Cluster	HCCA: Cluster_297

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00063910	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.06	Archaeplastida
AT2G23770	No alias	protein kinase family protein / peptidoglycan-binding...	0.02	Archaeplastida
AT2G33580	No alias	Protein kinase superfamily protein	0.06	Archaeplastida
GSVIVT01013461001	No alias	Protein modification.phosphorylation.TKL kinase...	0.05	Archaeplastida
GSVIVT01019038001	No alias	External stimuli response.biotic...	0.05	Archaeplastida
Gb_09697	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.09	Archaeplastida
LOC_Os02g09960.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.11	Archaeplastida
LOC_Os02g45750.1	No alias	Protein LYK5 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10436842g0010	No alias	LysM domain receptor-like kinase 3 OS=Medicago...	0.04	Archaeplastida
MA_475682g0010	No alias	protein kinase (LysM)	0.03	Archaeplastida
MA_646164g0010	No alias	protein kinase (LysM)	0.05	Archaeplastida
MA_892990g0010	No alias	protein kinase (LysM). LysM receptor kinase (NFR5/NFP)	0.05	Archaeplastida
MA_9476g0020	No alias	protein kinase (LysM)	0.03	Archaeplastida
Mp8g11780.1	No alias	protein kinase (LysM)	0.03	Archaeplastida
Solyc02g089900.1.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)	0.06	Archaeplastida
Solyc09g083210.3.1	No alias	protein kinase (LysM). LysM receptor kinase (NFR5/NFP)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	415	652
IPR018392	LysM_dom	205	243

External Links

No external refs found!

Zm00001e025053_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation