AT3G28958


Description : Cupredoxin superfamily protein


Gene families : OG0005412 (Archaeplastida) Phylogenetic Tree(s): OG0005412_tree ,
OG_05_0017427 (LandPlants) Phylogenetic Tree(s): OG_05_0017427_tree ,
OG_06_0016967 (SeedPlants) Phylogenetic Tree(s): OG_06_0016967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28958
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G43730 No alias RNA-directed DNA polymerase (reverse... 0.01 Archaeplastida
AT1G45063 No alias copper ion binding;electron carriers 0.02 Archaeplastida
AT1G60720 No alias RNA-directed DNA polymerase (reverse... 0.01 Archaeplastida
AT4G04650 No alias RNA-directed DNA polymerase (reverse... 0.02 Archaeplastida
AT4G05095 No alias BEST Arabidopsis thaliana protein match is: RNA-directed... 0.06 Archaeplastida
AT5G11565 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
Type GO Term Name Evidence Source
BP GO:0000412 histone peptidyl-prolyl isomerization IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005527 macrolide binding IEP Neighborhood
MF GO:0005528 FK506 binding IEP Neighborhood
CC GO:0009543 chloroplast thylakoid lumen IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0031977 thylakoid lumen IEP Neighborhood
CC GO:0031978 plastid thylakoid lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 86 143
No external refs found!