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  5. AT3G29580

AT3G29580


Description : Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G29580
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.03 Archaeplastida
AT1G31380 No alias TRAF-like family protein 0.07 Archaeplastida
AT2G05410 No alias TRAF-like family protein 0.11 Archaeplastida
AT2G42455 No alias No description available 0.08 Archaeplastida
AT2G42460 No alias TRAF-like family protein 0.06 Archaeplastida
AT2G42465 No alias No description available 0.06 Archaeplastida
AT2G42470 No alias TRAF-like family protein 0.12 Archaeplastida
AT2G42475 No alias No description available 0.1 Archaeplastida
AT2G42480 No alias TRAF-like family protein 0.08 Archaeplastida
AT3G44805 No alias TRAF-like superfamily protein 0.03 Archaeplastida
AT3G58240 No alias TRAF-like superfamily protein 0.08 Archaeplastida
AT3G58260 No alias TRAF-like family protein 0.1 Archaeplastida
AT3G58290 No alias TRAF-like superfamily protein 0.11 Archaeplastida
AT3G58340 No alias TRAF-like family protein 0.12 Archaeplastida
AT3G58360 No alias TRAF-like family protein 0.12 Archaeplastida
AT3G58370 No alias TRAF-like family protein 0.05 Archaeplastida
AT3G58400 No alias TRAF-like family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
CC GO:0001673 male germ cell nucleus IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
BP GO:0009830 cell wall modification involved in abscission IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0030332 cyclin binding IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
CC GO:0043073 germ cell nucleus IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0044277 cell wall disassembly IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:0080159 zygote elongation IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 13 117
IPR007942 PLipase-like 170 292
No external refs found!