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AT1G14580


Description : C2H2-like zinc finger protein


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G14580
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025166001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10436688g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_26324g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc04g008500.4.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e004751_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e010319_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:2000014 regulation of endosperm development IEP Neighborhood
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 83 104
No external refs found!