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  5. Zm00001e026491_P001

Zm00001e026491_P001


Description : no hits & (original description: none)


Gene families : OG0002233 (Archaeplastida) Phylogenetic Tree(s): OG0002233_tree ,
OG_05_0002168 (LandPlants) Phylogenetic Tree(s): OG_05_0002168_tree ,
OG_06_0001805 (SeedPlants) Phylogenetic Tree(s): OG_06_0001805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026491_P001
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00108880 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT1G06380 No alias Ribosomal protein L1p/L10e family 0.05 Archaeplastida
AT2G42650 No alias Ribosomal protein L1p/L10e family 0.09 Archaeplastida
AT3G58660 No alias Ribosomal protein L1p/L10e family 0.13 Archaeplastida
Cre07.g314100 No alias No description available 0.03 Archaeplastida
GSVIVT01000789001 No alias No description available 0.07 Archaeplastida
Gb_31610 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g48422.1 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_173360g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_550291g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9529545g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g11260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_11430V3.1 No alias Ribosomal protein L1p/L10e family 0.03 Archaeplastida
Pp3c8_1610V3.1 No alias Ribosomal protein L1p/L10e family 0.03 Archaeplastida
Solyc01g111420.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc04g008790.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 37 239
No external refs found!