Zm00001e027464_P001

Description : transcription factor (HSF)

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0017800 (LandPlants) Phylogenetic Tree(s): OG_05_0017800_tree ,
OG_06_0017336 (SeedPlants) Phylogenetic Tree(s): OG_06_0017336_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027464_P001
Cluster	HCCA: Cluster_194

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00262410	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00095p00016160	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AT1G32330	ATHSFA1D, HSFA1D	heat shock transcription factor A1D	0.04	Archaeplastida
AT1G67970	HSFA8, AT-HSFA8	heat shock transcription factor A8	0.05	Archaeplastida
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.03	Archaeplastida
AT3G22830	AT-HSFA6B, HSFA6B	heat shock transcription factor A6B	0.02	Archaeplastida
AT3G24520	AT-HSFC1, HSFC1	heat shock transcription factor C1	0.04	Archaeplastida
AT4G11660	AT-HSFB2B, HSFB2B	winged-helix DNA-binding transcription factor family protein	0.02	Archaeplastida
GSVIVT01002066001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01016067001	No alias	No description available	0.04	Archaeplastida
GSVIVT01020781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
GSVIVT01033257001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
LOC_Os03g06630.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os03g12370.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os04g48030.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os05g45410.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os08g36700.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
MA_9434330g0010	No alias	transcription factor (HSF)	0.03	Archaeplastida
Pp3c11_20430V3.1	No alias	heat shock transcription factor A1E	0.03	Archaeplastida
Pp3c1_32480V3.1	No alias	heat shock factor 3	0.03	Archaeplastida
Pp3c7_7720V3.1	No alias	heat shock transcription factor A1E	0.03	Archaeplastida
Solyc02g072060.3.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
Solyc03g006000.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e037244_P001	No alias	transcription factor (HSF)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	16	105

External Links

No external refs found!

Zm00001e027464_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation