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AT3G42940


Description : BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 66 Blast hits to 66 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0011538 (Archaeplastida) Phylogenetic Tree(s): OG0011538_tree ,
OG_05_0012894 (LandPlants) Phylogenetic Tree(s): OG_05_0012894_tree ,
OG_06_0012922 (SeedPlants) Phylogenetic Tree(s): OG_06_0012922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G42940
Cluster HCCA: Cluster_266


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006730 one-carbon metabolic process IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!