Zm00001e027593_P003

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000603 (LandPlants) Phylogenetic Tree(s): OG_05_0000603_tree ,
OG_06_0000543 (SeedPlants) Phylogenetic Tree(s): OG_06_0000543_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027593_P003
Cluster	HCCA: Cluster_335

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00225230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00065p00077750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G16060	ADAP	ARIA-interacting double AP2 domain protein	0.04	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G54990	SMZ	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G37750	DRG, CKC, CKC1, ANT	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G17430	BBM	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G67180	TOE3	target of early activation tagged (EAT) 3	0.06	Archaeplastida
Cre08.g385350	No alias	No description available	0.04	Archaeplastida
GSVIVT01002536001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01023697001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01027345001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_11937	No alias	transcription factor (AP2)	0.04	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_29561	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_33988	No alias	transcription factor (AP2)	0.04	Archaeplastida
Gb_39931	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_41702	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os01g59780.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.03	Archaeplastida
LOC_Os03g56050.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os04g55560.2	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os05g03040.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_10005612g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_30905g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.04	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.02	Archaeplastida
Solyc02g092050.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc03g044300.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc03g123430.4.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Solyc04g077490.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e000558_P003	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e005817_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e006752_P001	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e011951_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006541	glutamine metabolic process	IEP	Neighborhood
BP	GO:0006542	glutamine biosynthetic process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0016211	ammonia ligase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
BP	GO:0051259	protein complex oligomerization	IEP	Neighborhood
BP	GO:0051260	protein homooligomerization	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	244	294
IPR001471	AP2/ERF_dom	152	201

External Links

No external refs found!

Zm00001e027593_P003

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation