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  5. Zm00001e027948_P001

Zm00001e027948_P001


Description : formylmethionine deformylase (PDF)


Gene families : OG0004430 (Archaeplastida) Phylogenetic Tree(s): OG0004430_tree ,
OG_05_0005386 (LandPlants) Phylogenetic Tree(s): OG_05_0005386_tree ,
OG_06_0008908 (SeedPlants) Phylogenetic Tree(s): OG_06_0008908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027948_P001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT5G14660 DEF2, ATDEF2, PDF1B peptide deformylase 1B 0.06 Archaeplastida
Cre01.g039750 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Gb_33171 No alias formylmethionine deformylase (PDF) 0.03 Archaeplastida
LOC_Os01g44980.1 No alias formylmethionine deformylase (PDF) 0.05 Archaeplastida
LOC_Os01g45070.1 No alias formylmethionine deformylase (PDF) 0.03 Archaeplastida
MA_10434550g0010 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 74 220
No external refs found!