Zm00001e027961_P001

Description : AAA-ATPase At3g50940 OS=Arabidopsis thaliana (sp|q147f9|aatpc_arath : 295.0)

Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0021291 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020539 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027961_P001
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267180	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00014p00241930	evm_27.TU.AmTr_v1...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00019p00244450	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28510 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00019p00244830	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.06	Archaeplastida
AMTR_s00024p00191310	evm_27.TU.AmTr_v1...	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00036p00176790	evm_27.TU.AmTr_v1...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.04	Archaeplastida
AT1G43910	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT2G18193	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT3G28510	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT3G28520	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT3G28540	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.06	Archaeplastida
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Archaeplastida
AT3G50930	BCS1	cytochrome BC1 synthesis	0.03	Archaeplastida
AT4G25835	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT5G17760	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Archaeplastida
AT5G40010	AATP1	AAA-ATPase 1	0.04	Archaeplastida
GSVIVT01001352001	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01018890001	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01023336001	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01032552001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032553001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032554001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_16063	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_27547	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os01g19260.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os01g40140.1	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g42030.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.05	Archaeplastida
LOC_Os01g45450.1	No alias	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os03g02330.1	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os03g38800.1	No alias	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os03g58790.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os03g58800.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os05g51130.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os06g48240.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os07g09420.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os07g09470.1	No alias	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os09g27340.1	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os10g22700.1	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g24320.1	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os12g28137.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os12g28177.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os12g28550.1	No alias	AAA-ATPase At5g40000 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g28590.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g44190.1	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10067279g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10285593g0010	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_10435468g0010	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10435468g0020	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10436428g0010	No alias	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_161279g0020	No alias	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_23842g0010	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_344969g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.06	Archaeplastida
MA_56516g0010	No alias	AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis...	0.03	Archaeplastida
MA_69227g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Pp3c12_21960V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Archaeplastida
Pp3c14_5870V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
Pp3c1_35560V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Archaeplastida
Pp3c8_710V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Solyc03g033790.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.06	Archaeplastida
Solyc03g033840.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.05	Archaeplastida
Solyc03g082640.3.1	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc12g055810.1.1	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e004348_P001	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e006040_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e007733_P001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e011416_P001	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e012527_P001	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e013139_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e033043_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e038158_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	242	371
IPR025753	AAA_N_dom	57	135

External Links

No external refs found!

Zm00001e027961_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation