1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e028052_P001

Zm00001e028052_P001


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0005934 (SeedPlants) Phylogenetic Tree(s): OG_06_0005934_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028052_P001
Cluster HCCA: Cluster_348

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00115490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.02 Archaeplastida
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.03 Archaeplastida
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.03 Archaeplastida
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
GSVIVT01017810001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
Gb_28725 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os01g48370.1 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.05 Archaeplastida
Pp3c24_19540V3.1 No alias tubby like protein 3 0.05 Archaeplastida
Solyc07g062390.4.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Solyc10g046970.2.1 No alias transcription factor (TUB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004788 thiamine diphosphokinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0030975 thiamine binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0042357 thiamine diphosphate metabolic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000007 Tubby_C 100 353
No external refs found!