1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G44060

AT3G44060


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G44060
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.05 Archaeplastida
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT1G64540 No alias F-box/FBD-like domains containing protein 0.06 Archaeplastida
AT2G29910 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT2G29930 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.04 Archaeplastida
AT3G44180 No alias syntaxin-related family protein 0.02 Archaeplastida
AT3G49150 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G54160 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G58880 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G58920 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT3G58960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT3G59160 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G59190 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59200 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.1 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.09 Archaeplastida
AT3G62440 No alias F-box/RNI-like superfamily protein 0.1 Archaeplastida
AT4G13960 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida
AT5G25860 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.07 Archaeplastida
AT5G38396 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT5G41630 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT5G41830 No alias RNI-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 153 178
IPR001810 F-box_dom 2 37
No external refs found!