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Description : no hits & (original description: none)
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0012081 (LandPlants) Phylogenetic Tree(s): OG_05_0012081_tree ,
OG_06_0012161 (SeedPlants) Phylogenetic Tree(s): OG_06_0012161_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e028503_P001 | |
| Cluster | HCCA: Cluster_180 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00263110 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.02 | Archaeplastida | |
| AMTR_s00024p00225420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
| AMTR_s00031p00067070 | No alias | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | Archaeplastida | |
| AMTR_s00038p00071780 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | Archaeplastida | |
| AMTR_s00039p00023570 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | Archaeplastida | |
| AMTR_s00049p00210350 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
| AMTR_s00049p00223290 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.02 | Archaeplastida | |
| AMTR_s00061p00127300 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | Archaeplastida | |
| AMTR_s00063p00172440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
| AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | Archaeplastida | |
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
| AMTR_s00081p00056740 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | Archaeplastida | |
| AMTR_s00147p00097570 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | Archaeplastida | |
| AMTR_s02193p00008230 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | Archaeplastida | |
| AMTR_s03531p00004900 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.02 | Archaeplastida | |
| AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| AT2G04860 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
| AT2G22070 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Archaeplastida | |
| AT2G41080 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Archaeplastida | |
| AT3G15930 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| AT3G18970 | MEF20 | mitochondrial editing factor 20 | 0.03 | Archaeplastida | |
| AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
| AT4G13650 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Archaeplastida | |
| AT5G52850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00021312.67 | No alias | No description available | 0.01 | Archaeplastida | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | Archaeplastida | |
| GSVIVT01025295001 | No alias | Pentatricopeptide repeat-containing protein At2g22410,... | 0.07 | Archaeplastida | |
| GSVIVT01026181001 | No alias | Pentatricopeptide repeat-containing protein At5g08305... | 0.06 | Archaeplastida | |
| GSVIVT01027196001 | No alias | Pentatricopeptide repeat-containing protein At5g08510... | 0.04 | Archaeplastida | |
| GSVIVT01029382001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| GSVIVT01036169001 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | Archaeplastida | |
| Gb_00601 | No alias | RNA editing factor (OTP82) | 0.03 | Archaeplastida | |
| Gb_00852 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
| Gb_06193 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | Archaeplastida | |
| Gb_15639 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | Archaeplastida | |
| Gb_17092 | No alias | RNA editing factor (OTP82) | 0.03 | Archaeplastida | |
| Gb_17620 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
| Gb_18979 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
| Gb_20153 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| Gb_21949 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
| Gb_22658 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | Archaeplastida | |
| Gb_24515 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida | |
| Gb_32439 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | Archaeplastida | |
| Gb_37554 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
| Gb_38249 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | Archaeplastida | |
| Gb_38938 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
| Gb_40976 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Gb_41341 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
| LOC_Os01g41650.1 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | Archaeplastida | |
| LOC_Os01g46230.1 | No alias | RNA editing factor (MEF1) | 0.03 | Archaeplastida | |
| LOC_Os05g12130.1 | No alias | RNA editing factor (ECD1) | 0.02 | Archaeplastida | |
| LOC_Os05g49920.1 | No alias | RNA editing factor (ECB2/VAC1) | 0.02 | Archaeplastida | |
| LOC_Os06g02200.1 | No alias | RNA editing factor (CRR22) | 0.04 | Archaeplastida | |
| LOC_Os06g08650.1 | No alias | Pentatricopeptide repeat-containing protein At2g03380,... | 0.04 | Archaeplastida | |
| LOC_Os06g40860.1 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | Archaeplastida | |
| LOC_Os08g04400.1 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | Archaeplastida | |
| LOC_Os08g33700.1 | No alias | Pentatricopeptide repeat-containing protein At3g47530... | 0.02 | Archaeplastida | |
| MA_10433543g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
| MA_124868g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
| MA_141731g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | Archaeplastida | |
| MA_511569g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida | |
| Pp3c5_15090V3.1 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Archaeplastida | |
| Solyc01g006920.4.1 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | Archaeplastida | |
| Solyc03g093630.3.1 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida | |
| Solyc03g097850.1.1 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | Archaeplastida | |
| Solyc04g063300.3.1 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.05 | Archaeplastida | |
| Solyc04g082870.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.05 | Archaeplastida | |
| Solyc11g006700.1.1 | No alias | Pentatricopeptide repeat-containing protein At5g04780,... | 0.02 | Archaeplastida | |
| Solyc11g008970.1.1 | No alias | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | Archaeplastida | |
| Solyc11g062250.2.1 | No alias | Pentatricopeptide repeat-containing protein At2g22410,... | 0.06 | Archaeplastida | |
| Solyc11g067210.1.1 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |