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Description : NUP62 nucleoporin of nuclear pore complex
Gene families : OG0006534 (Archaeplastida) Phylogenetic Tree(s): OG0006534_tree ,
OG_05_0008725 (LandPlants) Phylogenetic Tree(s): OG_05_0008725_tree ,
OG_06_0009766 (SeedPlants) Phylogenetic Tree(s): OG_06_0009766_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e028707_P001 | |
| Cluster | HCCA: Cluster_132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00215820 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | Archaeplastida | |
| Cre16.g677700 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | Archaeplastida | |
| GSVIVT01018216001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | Archaeplastida | |
| LOC_Os01g63780.1 | No alias | NUP62 nucleoporin of nuclear pore complex | 0.06 | Archaeplastida | |
| Pp3c15_14630V3.1 | No alias | structural constituent of nuclear pore | 0.02 | Archaeplastida | |
| Solyc01g090670.3.1 | No alias | NUP62 nucleoporin of nuclear pore complex | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Neighborhood |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Neighborhood |
| BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Neighborhood |
| BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Neighborhood |
| MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Neighborhood |
| BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Neighborhood |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Neighborhood |
| BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0051783 | regulation of nuclear division | IEP | Neighborhood |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Neighborhood |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Neighborhood |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Neighborhood |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007758 | Nucleoporin_NSP1_C | 528 | 627 |
| No external refs found! |