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  5. Zm00001e028720_P001

Zm00001e028720_P001


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028720_P001
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.11 Archaeplastida
AMTR_s00051p00020930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00405p00009920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT1G46480 WOX4 WUSCHEL related homeobox 4 0.03 Archaeplastida
AT3G03660 WOX11 WUSCHEL related homeobox 11 0.04 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.04 Archaeplastida
AT5G46010 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01008424001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_01484 No alias transcription factor (WOX) 0.05 Archaeplastida
Gb_12565 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_29958 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os01g63510.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os03g20910.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os07g48560.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os08g14400.1 No alias transcription factor (WOX) 0.07 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_42637g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
MA_8850184g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g078650.4.1 No alias transcription factor (WOX) 0.03 Archaeplastida
Solyc11g072790.2.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e006644_P002 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e029534_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e041785_P001 No alias transcription factor (WOX) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 14 74
No external refs found!