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  5. Zm00001e029191_P001

Zm00001e029191_P001


Description : Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana (sp|q7xa78|d27_arath : 124.0)


Gene families : OG0001228 (Archaeplastida) Phylogenetic Tree(s): OG0001228_tree ,
OG_05_0002282 (LandPlants) Phylogenetic Tree(s): OG_05_0002282_tree ,
OG_06_0003035 (SeedPlants) Phylogenetic Tree(s): OG_06_0003035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029191_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.07 Archaeplastida
AT1G64680 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 Archaeplastida
GSVIVT01019663001 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.06 Archaeplastida
GSVIVT01028138001 No alias Beta-carotene isomerase D27, chloroplastic... 0.09 Archaeplastida
LOC_Os05g04070.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.04 Archaeplastida
LOC_Os08g02210.2 No alias Beta-carotene isomerase D27, chloroplastic... 0.06 Archaeplastida
MA_167711g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_18999g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp6g01750.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.04 Archaeplastida
Pp3c26_11090V3.1 No alias No annotation 0.03 Archaeplastida
Solyc06g084610.4.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.04 Archaeplastida
Solyc08g008630.4.1 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025114 DUF4033 213 295
No external refs found!