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  5. Zm00001e029260_P001

Zm00001e029260_P001


Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0000330 (LandPlants) Phylogenetic Tree(s): OG_05_0000330_tree ,
OG_06_0001836 (SeedPlants) Phylogenetic Tree(s): OG_06_0001836_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029260_P001
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G06230 GTE4 global transcription factor group E4 0.04 Archaeplastida
AT3G01770 ATBET10, BET10 bromodomain and extraterminal domain protein 10 0.04 Archaeplastida
AT3G27260 GTE8 global transcription factor group E8 0.03 Archaeplastida
AT5G14270 BET9, ATBET9 bromodomain and extraterminal domain protein 9 0.04 Archaeplastida
Cre03.g168050 No alias Transcription factor GTE1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre08.g367300 No alias Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01001835001 No alias Transcription factor GTE8 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01008492001 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01021322001 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01034328001 No alias Transcription factor GTE1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Gb_30202 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
LOC_Os02g15220.2 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os06g04640.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
MA_10429630g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10429630g0020 No alias Transcription factor GTE10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435152g0020 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.05 Archaeplastida
Pp3c12_15340V3.1 No alias DNA-binding bromodomain-containing protein 0.04 Archaeplastida
Solyc02g071510.3.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Solyc02g091660.3.1 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Solyc03g111090.4.1 No alias Transcription factor GTE10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g062660.4.1 No alias transcriptional co-activator (BET/GTE) 0.09 Archaeplastida
Solyc09g090370.3.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Solyc10g008070.4.1 No alias Transcription factor GTE4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g014170.2.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001487 Bromodomain 174 257
IPR027353 NET_dom 364 425
No external refs found!