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  5. Zm00001e030385_P001

Zm00001e030385_P001


Description : tRNA pseudouridine synthase (TruA). receptor-like protein kinase (RLCK-VIIa)


Gene families : OG0000110 (Archaeplastida) Phylogenetic Tree(s): OG0000110_tree ,
OG_05_0007963 (LandPlants) Phylogenetic Tree(s): OG_05_0007963_tree ,
OG_06_0005803 (SeedPlants) Phylogenetic Tree(s): OG_06_0005803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030385_P001
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Pp3c7_4070V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 73 255
IPR020097 PsdUridine_synth_TruA_a/b_dom 590 672
No external refs found!