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  5. AT3G45860

AT3G45860 (CRK4)


Aliases : CRK4

Description : cysteine-rich RLK (RECEPTOR-like protein kinase) 4


Gene families : OG0000056 (Archaeplastida) Phylogenetic Tree(s): OG0000056_tree ,
OG_05_0000023 (LandPlants) Phylogenetic Tree(s): OG_05_0000023_tree ,
OG_06_0000034 (SeedPlants) Phylogenetic Tree(s): OG_06_0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G45860
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00258590 evm_27.TU.AmTr_v1... Cysteine-rich receptor-like protein kinase 10... 0.04 Archaeplastida
AMTR_s00035p00082360 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00060p00079250 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00106p00036370 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.TKL kinase... 0.04 Archaeplastida
AMTR_s00106p00036910 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT4G05200 CRK25 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 0.03 Archaeplastida
AT4G23270 CRK19 cysteine-rich RLK (RECEPTOR-like protein kinase) 19 0.03 Archaeplastida
AT4G23280 CRK20 cysteine-rich RLK (RECEPTOR-like protein kinase) 20 0.04 Archaeplastida
GSVIVT01005158001 No alias Protein modification.phosphorylation.TKL kinase... 0.08 Archaeplastida
GSVIVT01005163001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 Archaeplastida
GSVIVT01005164001 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01005167001 No alias Cysteine-rich receptor-like protein kinase 29... 0.03 Archaeplastida
GSVIVT01005168001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 Archaeplastida
GSVIVT01005286001 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01006683001 No alias Protein modification.phosphorylation.TKL kinase... 0.05 Archaeplastida
GSVIVT01006872001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 Archaeplastida
GSVIVT01007138001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.04 Archaeplastida
GSVIVT01030634001 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030637001 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01034326001 No alias Protein modification.phosphorylation.TKL kinase... 0.05 Archaeplastida
GSVIVT01036854001 No alias Cysteine-rich receptor-like protein kinase 25... 0.07 Archaeplastida
Gb_07082 No alias Cysteine-rich receptor-like protein kinase 25... 0.02 Archaeplastida
Gb_12661 No alias plasmodesmal protein (PDLP) 0.02 Archaeplastida
Gb_13104 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Gb_13106 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.02 Archaeplastida
Gb_16373 No alias protein kinase (DUF26). protein kinase (SD-1) 0.02 Archaeplastida
Gb_17523 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Gb_24738 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Gb_29501 No alias protein kinase (DUF26). protein kinase (SD-1) 0.02 Archaeplastida
Gb_33803 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Gb_35039 No alias Cysteine-rich receptor-like protein kinase 10... 0.03 Archaeplastida
Gb_35264 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Gb_38715 No alias protein kinase (SD-1) 0.04 Archaeplastida
LOC_Os03g16950.1 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g19840.1 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g41370.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.04 Archaeplastida
LOC_Os07g35260.1 No alias protein kinase (SD-1) 0.04 Archaeplastida
LOC_Os07g35290.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.02 Archaeplastida
LOC_Os07g35580.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
LOC_Os07g35640.1 No alias Cysteine-rich receptor-like protein kinase 10 OS=Oryza... 0.03 Archaeplastida
LOC_Os07g35660.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.04 Archaeplastida
LOC_Os07g35680.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.05 Archaeplastida
LOC_Os07g35690.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.02 Archaeplastida
LOC_Os07g43560.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.02 Archaeplastida
LOC_Os08g04210.1 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os08g04230.1 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os08g04240.1 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os08g04250.1 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.02 Archaeplastida
MA_10061449g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429772g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10430232g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10430478g0010 No alias protein kinase (SD-1) 0.03 Archaeplastida
MA_10436801g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 Archaeplastida
MA_195678g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 Archaeplastida
MA_45879g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.02 Archaeplastida
MA_6876377g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g079580.4.1 No alias protein kinase (SD-1) 0.06 Archaeplastida
Solyc02g080010.2.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.05 Archaeplastida
Solyc02g080040.4.1 No alias protein kinase (SD-1) 0.04 Archaeplastida
Solyc02g080060.1.1 No alias Cysteine-rich receptor-like protein kinase 29... 0.04 Archaeplastida
Solyc02g080070.3.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.04 Archaeplastida
Solyc02g080080.3.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Solyc03g111540.2.1 No alias protein kinase (DUF26). protein kinase (SD-1) 0.06 Archaeplastida
Solyc04g007880.4.1 No alias protein kinase (SD-1) 0.02 Archaeplastida
Solyc09g057960.1.1 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.05 Archaeplastida
Solyc12g005720.1.1 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e009808_P001 No alias Putative cysteine-rich receptor-like protein kinase 35... 0.03 Archaeplastida
Zm00001e010509_P001 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Zm00001e029633_P001 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e032003_P001 No alias protein kinase (DUF26). protein kinase (SD-1) 0.04 Archaeplastida
Zm00001e035159_P001 No alias protein kinase (DUF26). protein kinase (SD-1) 0.03 Archaeplastida
Zm00001e035161_P001 No alias protein kinase (DUF26). protein kinase (SD-1) 0.05 Archaeplastida
Zm00001e035166_P001 No alias Cysteine-rich receptor-like protein kinase 6 OS=Oryza... 0.04 Archaeplastida
Zm00001e035168_P001 No alias protein kinase (SD-1) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006952 defense response TAS Interproscan
BP GO:0009751 response to salicylic acid IEP Interproscan
BP GO:0012501 programmed cell death IMP Interproscan
MF GO:0016301 kinase activity ISS Interproscan
BP GO:0042742 defense response to bacterium IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Neighborhood
BP GO:0001666 response to hypoxia IEP Neighborhood
BP GO:0001763 morphogenesis of a branching structure IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
MF GO:0004338 glucan exo-1,3-beta-glucosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009626 plant-type hypersensitive response IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009814 defense response, incompatible interaction IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009816 defense response to bacterium, incompatible interaction IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010311 lateral root formation IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0010942 positive regulation of cell death IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034050 host programmed cell death induced by symbiont IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043068 positive regulation of programmed cell death IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0080181 lateral root branching IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 354 624
IPR002902 GNK2 36 132
IPR002902 GNK2 157 244
No external refs found!