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  5. Zm00001e031504_P001

Zm00001e031504_P001


Description : component SNX2 of Retromer protein recycling complex


Gene families : OG0002219 (Archaeplastida) Phylogenetic Tree(s): OG0002219_tree ,
OG_05_0002609 (LandPlants) Phylogenetic Tree(s): OG_05_0002609_tree ,
OG_06_0002925 (SeedPlants) Phylogenetic Tree(s): OG_06_0002925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031504_P001
Cluster HCCA: Cluster_343

Target Alias Description ECC score Gene Family Method Actions
AT5G58440 SNX2a sorting nexin 2A 0.03 Archaeplastida
Solyc06g050550.4.1 No alias component SNX2 of Retromer protein recycling complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001683 Phox 143 236
IPR015404 Vps5_C 306 537
No external refs found!