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  5. Zm00001e032821_P001

Zm00001e032821_P001


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032821_P001
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.03 Archaeplastida
AT3G18550 BRC1, ATTCP18, TCP18 TCP family transcription factor 0.03 Archaeplastida
AT4G18390 TCP2 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.04 Archaeplastida
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.04 Archaeplastida
GSVIVT01008234001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.06 Archaeplastida
GSVIVT01014236001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01021528001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
Gb_37187 No alias transcription factor (TCP) 0.04 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.03 Archaeplastida
Gb_38377 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os01g11550.1 No alias transcription factor (TCP) 0.14 Archaeplastida
LOC_Os03g57190.1 No alias transcription factor (TCP) 0.07 Archaeplastida
LOC_Os05g43760.1 No alias transcription factor (TCP) 0.06 Archaeplastida
LOC_Os07g05720.1 No alias transcription factor (TCP) 0.05 Archaeplastida
LOC_Os12g42190.1 No alias transcription factor (TCP) 0.09 Archaeplastida
MA_101752g0020 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_37369g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc12g014140.3.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e005407_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e009811_P001 No alias transcription factor (TCP) 0.06 Archaeplastida
Zm00001e019734_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e027401_P002 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e034097_P001 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 61 193
No external refs found!