1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e033486_P001

Zm00001e033486_P001


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001565 (Archaeplastida) Phylogenetic Tree(s): OG0001565_tree ,
OG_05_0001513 (LandPlants) Phylogenetic Tree(s): OG_05_0001513_tree ,
OG_06_0001569 (SeedPlants) Phylogenetic Tree(s): OG_06_0001569_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033486_P001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00198p00016850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT1G47056 VFB1 VIER F-box proteine 1 0.03 Archaeplastida
GSVIVT01000227001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Gb_13260 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
MA_10431549g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 77 106
No external refs found!