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  5. Zm00001e034206_P001

Zm00001e034206_P001


Description : Tetraspanin-8 OS=Arabidopsis thaliana (sp|q8s8q6|tet8_arath : 278.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034206_P001
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00136590 evm_27.TU.AmTr_v1... Tetraspanin-8 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G23810 TET8 tetraspanin8 0.05 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.04 Archaeplastida
GSVIVT01023726001 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_00679 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_25198 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_26509 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g03530.1 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g16050.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g34460.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g25760.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_19090g0010 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_24323g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo231326 No alias Tetraspanin-3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo266767 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc07g006280.3.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g025510.4.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e029484_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e030929_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 8 254
No external refs found!