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  5. Zm00001e034219_P001

Zm00001e034219_P001


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034219_P001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.03 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.09 Archaeplastida
AT1G68480 JAG C2H2 and C2HC zinc fingers superfamily protein 0.09 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.05 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G06650 GIS2 C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.03 Archaeplastida
AT5G27880 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
GSVIVT01009401001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01011610001 No alias No description available 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_07777 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_25685 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g08510.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os02g57550.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g11680.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os03g57240.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g36650.1 No alias C2H2 zinc finger transcription factor 0.11 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo110103 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Solyc01g060420.2.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g061160.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc07g006880.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e017030_P002 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!