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  5. Zm00001e034314_P001

Zm00001e034314_P001


Description : MMD1/DUET meiotic recombination regulating protein. PHD finger transcription factor


Gene families : OG0000911 (Archaeplastida) Phylogenetic Tree(s): OG0000911_tree ,
OG_05_0000834 (LandPlants) Phylogenetic Tree(s): OG_05_0000834_tree ,
OG_06_0001753 (SeedPlants) Phylogenetic Tree(s): OG_06_0001753_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034314_P001
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00102840 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00043p00044990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
AT2G07714 No alias transcription factor-related 0.02 Archaeplastida
ATMG00550 ORF160 BEST Arabidopsis thaliana protein match is:... 0.03 Archaeplastida
GSVIVT01011588001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.15 Archaeplastida
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 Archaeplastida
LOC_Os09g27620.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.21 Archaeplastida
Mp3g06700.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Solyc04g008420.1.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.18 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004594 pantothenate kinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 614 660
No external refs found!