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  5. Zm00001e034952_P003

Zm00001e034952_P003


Description : PRONE-type RopGEF guanine nucleotide exchange factor


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0000833 (LandPlants) Phylogenetic Tree(s): OG_05_0000833_tree ,
OG_06_0001817 (SeedPlants) Phylogenetic Tree(s): OG_06_0001817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034952_P003
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00182400 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.06 Archaeplastida
AMTR_s00009p00249740 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
AMTR_s00011p00264790 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
AMTR_s00109p00064220 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.02 Archaeplastida
AMTR_s00165p00047580 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.05 Archaeplastida
AT2G45890 ATROPGEF4, RHS11, ROPGEF4 RHO guanyl-nucleotide exchange factor 4 0.03 Archaeplastida
AT3G55660 ROPGEF6, ATROPGEF6 ROP (rho of plants) guanine nucleotide exchange factor 6 0.03 Archaeplastida
AT4G13240 ATROPGEF9, ROPGEF9 RHO guanyl-nucleotide exchange factor 9 0.02 Archaeplastida
AT4G38430 ATROPGEF1, ROPGEF1 rho guanyl-nucleotide exchange factor 1 0.06 Archaeplastida
GSVIVT01015369001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
GSVIVT01017070001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
GSVIVT01023897001 No alias Multi-process regulation.Rop GTPase regulatory... 0.11 Archaeplastida
Gb_34956 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
LOC_Os01g48410.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
LOC_Os01g55520.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
LOC_Os02g17240.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os02g47420.3 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
LOC_Os05g38000.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os07g29780.2 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os09g37270.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.07 Archaeplastida
MA_10311111g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
MA_106710g0030 No alias Cytochrome P450 94C1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7016387g0010 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
MA_79976g0010 No alias Rho guanine nucleotide exchange factor 8 OS=Arabidopsis... 0.05 Archaeplastida
Pp3c10_9910V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.03 Archaeplastida
Pp3c1_20V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.03 Archaeplastida
Pp3c2_28420V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.03 Archaeplastida
Pp3c2_4460V3.1 No alias RHO guanyl-nucleotide exchange factor 7 0.04 Archaeplastida
Smo43109 No alias Multi-process regulation.Rop GTPase regulatory... 0.02 Archaeplastida
Solyc01g111930.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
Solyc04g082110.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Solyc08g006550.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Solyc10g086660.2.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e014205_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida
Zm00001e019750_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
Zm00001e024760_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 100 473
No external refs found!