1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G50140

AT3G50140


Description : Plant protein of unknown function (DUF247)


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0000062 (SeedPlants) Phylogenetic Tree(s): OG_06_0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50140
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00254390 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc09g009230.2.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009106 lipoate metabolic process IEP Neighborhood
BP GO:0009269 response to desiccation IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009625 response to insect IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009804 coumarin metabolic process IEP Neighborhood
BP GO:0009805 coumarin biosynthetic process IEP Neighborhood
BP GO:0009814 defense response, incompatible interaction IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP Neighborhood
BP GO:0010393 galacturonan metabolic process IEP Neighborhood
BP GO:0010396 rhamnogalacturonan II metabolic process IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
MF GO:0043295 glutathione binding IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045488 pectin metabolic process IEP Neighborhood
BP GO:0045489 pectin biosynthetic process IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048468 cell development IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0052325 cell wall pectin biosynthetic process IEP Neighborhood
BP GO:0052546 cell wall pectin metabolic process IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0080147 root hair cell development IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:1900750 oligopeptide binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 115 522
No external refs found!