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  5. Zm00001e035384_P001

Zm00001e035384_P001


Description : transcription factor (GRAS)


Gene families : OG0001538 (Archaeplastida) Phylogenetic Tree(s): OG0001538_tree ,
OG_05_0000997 (LandPlants) Phylogenetic Tree(s): OG_05_0000997_tree ,
OG_06_0001832 (SeedPlants) Phylogenetic Tree(s): OG_06_0001832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035384_P001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00136400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.06 Archaeplastida
AMTR_s00088p00161000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.05 Archaeplastida
AMTR_s00186p00018500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.06 Archaeplastida
AT1G21450 SCL1 SCARECROW-like 1 0.04 Archaeplastida
AT1G50600 SCL5 scarecrow-like 5 0.04 Archaeplastida
AT4G17230 SCL13 SCARECROW-like 13 0.08 Archaeplastida
GSVIVT01010007001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.06 Archaeplastida
GSVIVT01037777001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 Archaeplastida
Gb_30494 No alias transcription factor (GRAS) 0.03 Archaeplastida
LOC_Os01g65900.1 No alias transcription factor (GRAS) 0.04 Archaeplastida
LOC_Os07g36170.2 No alias transcription factor (GRAS) 0.04 Archaeplastida
LOC_Os07g39470.1 No alias transcription factor (GRAS) 0.07 Archaeplastida
LOC_Os10g22430.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc04g064550.1.1 No alias transcription factor (GRAS) 0.04 Archaeplastida
Solyc05g054170.4.1 No alias transcription factor (GRAS) 0.06 Archaeplastida
Solyc06g035620.3.1 No alias transcription factor (GRAS) 0.05 Archaeplastida
Solyc07g065270.1.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc12g005340.3.1 No alias transcription factor (GRAS) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 188 557
No external refs found!