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  5. AT3G50890

AT3G50890 (ZHD7, HB28, AtHB28)


Aliases : ZHD7, HB28, AtHB28

Description : homeobox protein 28


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0042375 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G50890
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.08 Archaeplastida
AMTR_s00119p00074870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT5G65410 ZHD1, ZFHD2, HB25, ATHB25 homeobox protein 25 0.05 Archaeplastida
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01023137001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_15163 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Gb_18045 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os02g47770.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
LOC_Os03g50920.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os04g35500.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os08g34010.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.07 Archaeplastida
LOC_Os09g24810.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os09g29130.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os11g13930.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
LOC_Os12g10630.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
MA_101972g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_19630g0020 No alias transcription factor (zf-HD) 0.04 Archaeplastida
MA_19630g0030 No alias transcription factor (zf-HD) 0.05 Archaeplastida
MA_453742g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_461761g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_470326g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g08190.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Pp3c19_20410V3.1 No alias homeobox protein 21 0.06 Archaeplastida
Pp3c1_15290V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.04 Archaeplastida
Pp3c7_15000V3.1 No alias homeobox protein 33 0.02 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Solyc02g085160.1.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
Solyc03g061620.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Solyc04g014260.2.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc04g074990.3.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Solyc04g080490.4.1 No alias transcription factor (zf-HD) 0.08 Archaeplastida
Zm00001e008082_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e009830_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e015590_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e018364_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e022486_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e023331_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009806 lignan metabolic process IEP Neighborhood
BP GO:0009807 lignan biosynthetic process IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0010358 leaf shaping IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0015645 fatty acid ligase activity IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031957 very long-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0045595 regulation of cell differentiation IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
MF GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity IEP Neighborhood
BP GO:0048366 leaf development IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
BP GO:1901371 regulation of leaf morphogenesis IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905421 regulation of plant organ morphogenesis IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
BP GO:2000025 regulation of leaf formation IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000039 regulation of trichome morphogenesis IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000122 negative regulation of stomatal complex development IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 58 110
No external refs found!