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  5. Zm00001e035935_P001

Zm00001e035935_P001


Description : regulatory component RPT2 of 26S proteasome


Gene families : OG0003745 (Archaeplastida) Phylogenetic Tree(s): OG0003745_tree ,
OG_05_0004265 (LandPlants) Phylogenetic Tree(s): OG_05_0004265_tree ,
OG_06_0005211 (SeedPlants) Phylogenetic Tree(s): OG_06_0005211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035935_P001
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT2G20140 No alias AAA-type ATPase family protein 0.02 Archaeplastida
AT4G29040 RPT2a regulatory particle AAA-ATPase 2A 0.02 Archaeplastida
Cpa|evm.model.tig00001042.6 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
Cre07.g329700 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
GSVIVT01028520001 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
LOC_Os03g18690.1 No alias regulatory component RPT2 of 26S proteasome 0.05 Archaeplastida
LOC_Os07g49150.1 No alias regulatory component RPT2 of 26S proteasome 0.04 Archaeplastida
MA_10381416g0010 No alias 26S proteasome regulatory subunit 4 homolog B... 0.03 Archaeplastida
MA_10431395g0010 No alias regulatory component RPT2 of 26S proteasome 0.02 Archaeplastida
Mp6g16470.1 No alias regulatory component RPT2 of 26S proteasome 0.03 Archaeplastida
Pp3c16_23220V3.1 No alias AAA-type ATPase family protein 0.06 Archaeplastida
Pp3c19_3770V3.1 No alias AAA-type ATPase family protein 0.03 Archaeplastida
Pp3c22_7710V3.1 No alias AAA-type ATPase family protein 0.05 Archaeplastida
Solyc06g083620.3.1 No alias regulatory component RPT2 of 26S proteasome 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 116 170
IPR003959 ATPase_AAA_core 229 362
No external refs found!