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  5. Zm00001e035953_P001

Zm00001e035953_P001


Description : PRR circadian clock time-of-day-dependent expressed repressor


Gene families : OG0000168 (Archaeplastida) Phylogenetic Tree(s): OG0000168_tree ,
OG_05_0000079 (LandPlants) Phylogenetic Tree(s): OG_05_0000079_tree ,
OG_06_0003030 (SeedPlants) Phylogenetic Tree(s): OG_06_0003030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035953_P001
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT2G46790 APRR9, TL1, PRR9 pseudo-response regulator 9 0.06 Archaeplastida
GSVIVT01025087001 No alias Two-component response regulator-like APRR7... 0.04 Archaeplastida
GSVIVT01025088001 No alias Multi-process regulation.circadian clock.PRR... 0.03 Archaeplastida
Gb_23159 No alias PRR circadian clock time-of-day-dependent expressed repressor 0.02 Archaeplastida
LOC_Os01g72330.1 No alias A-type cytokinin ARR response negative regulator 0.02 Archaeplastida
LOC_Os03g17570.3 No alias PRR circadian clock time-of-day-dependent expressed repressor 0.04 Archaeplastida
MA_111961g0010 No alias A-type cytokinin ARR response negative regulator 0.02 Archaeplastida
Solyc10g005030.4.1 No alias PRR circadian clock time-of-day-dependent expressed repressor 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 53 164
IPR010402 CCT_domain 611 653
No external refs found!