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Description : E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana (sp|q9spl2|cip8_arath : 93.6)
Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0001225 (SeedPlants) Phylogenetic Tree(s): OG_06_0001225_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e037527_P001 | |
| Cluster | HCCA: Cluster_231 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G13430 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT3G46620 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.02 | Archaeplastida | |
| AT3G60080 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT5G59550 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00000842.16 | No alias | No description available | 0.02 | Archaeplastida | |
| GSVIVT01024920001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| GSVIVT01025505001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| Gb_41745 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.02 | Archaeplastida | |
| LOC_Os03g16480.1 | No alias | E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| LOC_Os05g01940.1 | No alias | elicitor peptide precursor (proPEP) | 0.03 | Archaeplastida | |
| LOC_Os06g01200.1 | No alias | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.03 | Archaeplastida | |
| LOC_Os08g36170.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_77269g0010 | No alias | E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Mp3g17850.1 | No alias | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000813 | ESCRT I complex | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
| BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Neighborhood |
| CC | GO:0036452 | ESCRT complex | IEP | Neighborhood |
| CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044440 | endosomal part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Neighborhood |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 223 | 265 |
| No external refs found! |