Zm00001e037753_P001

Description : component FtsH1|2|5|6|8 of FtsH plastidial protease complexes

Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0002814 (LandPlants) Phylogenetic Tree(s): OG_05_0002814_tree ,
OG_06_0003173 (SeedPlants) Phylogenetic Tree(s): OG_06_0003173_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e037753_P001
Cluster	HCCA: Cluster_319

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00047160	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
AMTR_s00106p00108310	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.metallopeptidase...	0.03	Archaeplastida
AT1G06430	FTSH8	FTSH protease 8	0.04	Archaeplastida
AT1G50250	FTSH1	FTSH protease 1	0.06	Archaeplastida
AT2G30950	VAR2, FTSH2	FtsH extracellular protease family	0.04	Archaeplastida
AT3G02450	No alias	cell division protein ftsH, putative	0.03	Archaeplastida
AT5G42270	FTSH5, VAR1	FtsH extracellular protease family	0.06	Archaeplastida
Cpa\|evm.model.tig00000704.23	No alias	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.04	Archaeplastida
Cpa\|evm.model.tig00021127.121	No alias	ATP-dependent zinc metalloprotease FTSH 5, chloroplastic...	0.02	Archaeplastida
Cre09.g393950	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.07	Archaeplastida
Cre12.g485800	No alias	Protein degradation.peptidase families.metallopeptidase...	0.09	Archaeplastida
Cre17.g720050	No alias	Protein degradation.peptidase families.metallopeptidase...	0.09	Archaeplastida
GSVIVT01008686001	No alias	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.1	Archaeplastida
GSVIVT01020760001	No alias	Protein degradation.peptidase families.metallopeptidase...	0.06	Archaeplastida
Gb_06887	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.04	Archaeplastida
Gb_12830	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.11	Archaeplastida
Gb_32360	No alias	component FtsHi of protein translocation ATPase motor complex	0.02	Archaeplastida
LOC_Os06g45820.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.17	Archaeplastida
LOC_Os06g51029.1	No alias	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.13	Archaeplastida
MA_188257g0010	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_98203g0010	No alias	No annotation	0.11	Archaeplastida
Mp6g01370.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.04	Archaeplastida
Mp6g15080.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.04	Archaeplastida
Pp3c12_22830V3.1	No alias	FtsH extracellular protease family	0.07	Archaeplastida
Pp3c17_20370V3.1	No alias	AAA-type ATPase family protein	0.03	Archaeplastida
Pp3c20_15780V3.1	No alias	FtsH extracellular protease family	0.04	Archaeplastida
Pp3c23_14665V3.1	No alias	FtsH extracellular protease family	0.05	Archaeplastida
Pp3c23_8400V3.1	No alias	FtsH extracellular protease family	0.09	Archaeplastida
Smo139726	No alias	Protein degradation.peptidase families.metallopeptidase...	0.04	Archaeplastida
Smo149856	No alias	Protein degradation.peptidase families.metallopeptidase...	0.06	Archaeplastida
Smo152929	No alias	Protein degradation.peptidase families.metallopeptidase...	0.02	Archaeplastida
Smo98591	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.02	Archaeplastida
Solyc03g046340.3.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.03	Archaeplastida
Solyc08g082530.4.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003747	translation release factor activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006415	translational termination	IEP	Neighborhood
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
MF	GO:0008079	translation termination factor activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0022411	cellular component disassembly	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032984	protein-containing complex disassembly	IEP	Neighborhood
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043624	cellular protein complex disassembly	IEP	Neighborhood
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0098809	nitrite reductase activity	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	464	653
IPR003959	ATPase_AAA_core	250	381

External Links

No external refs found!

Zm00001e037753_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation