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  5. Zm00001e037785_P002

Zm00001e037785_P002


Description : transcription factor (bHLH)


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0001395 (SeedPlants) Phylogenetic Tree(s): OG_06_0001395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037785_P002
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G01260 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01013156001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01027162001 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_28786 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_36294 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g13460.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g50940.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os10g42430.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_5838g0020 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c3_9950V3.1 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.02 Archaeplastida
Solyc01g096050.4.1 No alias transcription factor (bHLH) 0.1 Archaeplastida
Solyc05g050560.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc08g083170.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc10g009270.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc10g009290.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e026126_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 55 241
IPR011598 bHLH_dom 523 568
No external refs found!