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  5. AT3G53270

AT3G53270


Description : Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein


Gene families : OG0005887 (Archaeplastida) Phylogenetic Tree(s): OG0005887_tree ,
OG_05_0005759 (LandPlants) Phylogenetic Tree(s): OG_05_0005759_tree ,
OG_06_0006721 (SeedPlants) Phylogenetic Tree(s): OG_06_0006721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G53270
Cluster HCCA: Cluster_22


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP Neighborhood
BP GO:0000578 embryonic axis specification IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003691 double-stranded telomeric DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004930 G-protein coupled receptor activity IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
MF GO:0008020 G-protein coupled photoreceptor activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009301 snRNA transcription IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
CC GO:0009707 chloroplast outer membrane IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009883 red or far-red light photoreceptor activity IEP Neighborhood
BP GO:0009942 longitudinal axis specification IEP Neighborhood
BP GO:0009945 radial axis specification IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016073 snRNA metabolic process IEP Neighborhood
BP GO:0016578 histone deubiquitination IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
MF GO:0031491 nucleosome binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035250 UDP-galactosyltransferase activity IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043696 dedifferentiation IEP Neighborhood
BP GO:0043697 cell dedifferentiation IEP Neighborhood
MF GO:0046481 digalactosyldiacylglycerol synthase activity IEP Neighborhood
BP GO:0060184 cell cycle switching IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0071368 cellular response to cytokinin stimulus IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:0098781 ncRNA transcription IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR019188 SNAPc_SNAP43 6 199
No external refs found!