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  5. Zm00001e039330_P002

Zm00001e039330_P002


Description : no hits & (original description: none)


Gene families : OG0003246 (Archaeplastida) Phylogenetic Tree(s): OG0003246_tree ,
OG_05_0002724 (LandPlants) Phylogenetic Tree(s): OG_05_0002724_tree ,
OG_06_0002188 (SeedPlants) Phylogenetic Tree(s): OG_06_0002188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039330_P002
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00083610 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G51650 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
GSVIVT01030211001 No alias No description available 0.06 Archaeplastida
Gb_11444 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10428546g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10428672g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g25340.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c12_1780V3.1 No alias No annotation 0.02 Archaeplastida
Solyc09g018310.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!