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  5. AT3G54160

AT3G54160


Description : RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54160
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.12 Archaeplastida
AT1G52650 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT2G29930 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.05 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT3G58820 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT3G58880 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT3G58920 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59180 No alias Protein with RNI-like/FBD-like domains 0.03 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.07 Archaeplastida
AT3G62440 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT4G00320 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT4G13960 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.1 Archaeplastida
AT5G25860 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.06 Archaeplastida
AT5G38396 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G41630 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 141 169
No external refs found!