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Description : transcription factor (RAV/NGATHA)
Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0000986 (SeedPlants) Phylogenetic Tree(s): OG_06_0000986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e039393_P002 | |
| Cluster | HCCA: Cluster_259 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00238950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | Archaeplastida | |
| AMTR_s00047p00199500 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
| AT2G46870 | NGA1 | AP2/B3-like transcriptional factor family protein | 0.03 | Archaeplastida | |
| AT4G01500 | NGA4 | AP2/B3-like transcriptional factor family protein | 0.02 | Archaeplastida | |
| LOC_Os01g04800.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.05 | Archaeplastida | |
| LOC_Os06g01860.1 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
| LOC_Os08g06120.1 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
| MA_116574g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | Archaeplastida | |
| MA_18923g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.06 | Archaeplastida | |
| MA_3503583g0010 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida | |
| MA_3834g0010 | No alias | transcription factor (RAV/NGATHA) | 0.05 | Archaeplastida | |
| MA_5039g0010 | No alias | transcription factor (RAV/NGATHA) | 0.04 | Archaeplastida | |
| MA_70029g0010 | No alias | transcription factor (RAV/NGATHA) | 0.03 | Archaeplastida | |
| MA_865117g0010 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | Archaeplastida | |
| Mp2g22250.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.05 | Archaeplastida | |
| Pp3c1_16700V3.1 | No alias | related to ABI3/VP1 1 | 0.03 | Archaeplastida | |
| Pp3c2_23660V3.1 | No alias | AP2/B3 transcription factor family protein | 0.03 | Archaeplastida | |
| Solyc04g007000.2.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | Archaeplastida | |
| Solyc10g083210.2.1 | No alias | transcription factor (RAV/NGATHA) | 0.03 | Archaeplastida | |
| Zm00001e000156_P001 | No alias | transcription factor (RAV/NGATHA) | 0.05 | Archaeplastida | |
| Zm00001e026443_P001 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003340 | B3_DNA-bd | 41 | 133 |
| No external refs found! |