Zm00001e039723_P001

Description : component VIP5/RTF1 of PAF1C transcription initiation and elongation complex

Gene families : OG0003042 (Archaeplastida) Phylogenetic Tree(s): OG0003042_tree ,
OG_05_0003234 (LandPlants) Phylogenetic Tree(s): OG_05_0003234_tree ,
OG_06_0002464 (SeedPlants) Phylogenetic Tree(s): OG_06_0002464_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e039723_P001
Cluster	HCCA: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os12g35030.1	No alias	component VIP5/RTF1 of PAF1C transcription initiation...	0.03	Archaeplastida
MA_64770g0010	No alias	component VIP5/RTF1 of PAF1C transcription initiation...	0.07	Archaeplastida
Pp3c12_17420V3.1	No alias	plus-3 domain-containing protein	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004343	Plus-3_dom	269	374

External Links

No external refs found!