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  5. Zm00001e039947_P001

Zm00001e039947_P001


Description : transcription factor (HD-ZIP IV)


Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0001739 (SeedPlants) Phylogenetic Tree(s): OG_06_0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039947_P001
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
AMTR_s00040p00231210 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G05230 HDG2 homeodomain GLABROUS 2 0.09 Archaeplastida
AT4G04890 PDF2 protodermal factor 2 0.11 Archaeplastida
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.1 Archaeplastida
AT4G26920 No alias START (StAR-related lipid-transfer) lipid-binding domain 0.03 Archaeplastida
AT5G07260 No alias START (StAR-related lipid-transfer) lipid-binding domain 0.03 Archaeplastida
GSVIVT01001986001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01027508001 No alias RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
GSVIVT01029396001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01030605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_05082 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Gb_16030 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
LOC_Os02g45250.1 No alias transcription factor (HD-ZIP IV) 0.07 Archaeplastida
LOC_Os04g53540.3 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
LOC_Os06g10600.1 No alias transcription factor (HD-ZIP IV) 0.13 Archaeplastida
LOC_Os08g04190.1 No alias transcription factor (HD-ZIP IV) 0.08 Archaeplastida
LOC_Os08g08820.2 No alias transcription factor (HD-ZIP IV) 0.11 Archaeplastida
LOC_Os09g35760.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
LOC_Os10g42490.1 No alias transcription factor (HD-ZIP IV) 0.09 Archaeplastida
MA_10318273g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_10374232g0010 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
MA_10426189g0030 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_10433688g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_1086446g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_110607g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_122121g0010 No alias transcription factor (HD-ZIP IV) 0.09 Archaeplastida
MA_16767g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_17048g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_305431g0010 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
MA_761114g0010 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
MA_8859629g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
MA_93471g0010 No alias transcription factor (HD-ZIP IV) 0.08 Archaeplastida
MA_9455995g0010 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Pp3c17_16910V3.1 No alias protodermal factor 2 0.03 Archaeplastida
Pp3c1_24020V3.1 No alias protodermal factor 2 0.03 Archaeplastida
Smo403927 No alias No description available 0.02 Archaeplastida
Solyc01g091630.3.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Solyc02g080260.4.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Solyc03g026070.4.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Solyc03g031760.4.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc03g098200.4.1 No alias transcription factor (HD-ZIP IV) 0.05 Archaeplastida
Solyc03g120620.3.1 No alias transcription factor (HD-ZIP IV) 0.03 Archaeplastida
Solyc06g072310.3.1 No alias transcription factor (HD-ZIP IV) 0.08 Archaeplastida
Solyc08g076370.3.1 No alias transcription factor (HD-ZIP IV) 0.04 Archaeplastida
Solyc10g005330.3.1 No alias transcription factor (HD-ZIP IV) 0.06 Archaeplastida
Solyc12g005830.3.1 No alias transcription factor (HD-ZIP IV) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 108 163
IPR002913 START_lipid-bd_dom 308 527
No external refs found!