AT3G55500 (EXPA16, ATHEXP ALPHA...)

Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16

Description : expansin A16

Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G55500

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00063420	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
AT1G12560	ATEXP7, EXPA7,...	expansin A7	0.02	Archaeplastida
AT1G20190	ATEXPA11, ATHEXP...	expansin 11	0.01	Archaeplastida
AT1G62980	EXPA18, EXP18,...	expansin A18	0.02	Archaeplastida
AT2G28950	EXPA6, ATEXP6,...	expansin A6	0.03	Archaeplastida
AT3G15370	ATHEXP ALPHA...	expansin 12	0.03	Archaeplastida
AT5G05290	EXPA2, ATHEXP...	expansin A2	0.02	Archaeplastida
GSVIVT01007987001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.04	Archaeplastida
GSVIVT01024572001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.01	Archaeplastida
Gb_01500	No alias	alpha-class expansin	0.02	Archaeplastida
Gb_01502	No alias	alpha-class expansin	0.02	Archaeplastida
Gb_01505	No alias	alpha-class expansin	0.03	Archaeplastida
Gb_01506	No alias	Expansin-A8 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Gb_07424	No alias	alpha-class expansin	0.06	Archaeplastida
Gb_07439	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os01g14660.1	No alias	alpha-class expansin	0.01	Archaeplastida
LOC_Os02g16730.1	No alias	alpha-class expansin	0.01	Archaeplastida
LOC_Os03g06050.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os03g31480.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os06g01920.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os10g30330.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os10g30340.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os10g39110.1	No alias	alpha-class expansin	0.02	Archaeplastida
MA_100868g0010	No alias	alpha-class expansin	0.01	Archaeplastida
MA_19117g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_86877g0010	No alias	alpha-class expansin	0.02	Archaeplastida
MA_8784268g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
Mp5g01930.1	No alias	alpha-class expansin	0.02	Archaeplastida
Mp5g20430.1	No alias	alpha-class expansin	0.2	Archaeplastida
Smo230202	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.01	Archaeplastida
Smo409954	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.02	Archaeplastida
Solyc04g081870.4.1	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e017221_P001	No alias	alpha-class expansin	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006949	syncytium formation	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	ISS	Interproscan
BP	GO:0009826	unidimensional cell growth	NAS	Interproscan
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	ISS	Interproscan
BP	GO:0009828	plant-type cell wall loosening	NAS	Interproscan
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0007568	aging	IEP	Neighborhood
BP	GO:0009631	cold acclimation	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009735	response to cytokinin	IEP	Neighborhood
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0010017	red or far-red light signaling pathway	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010150	leaf senescence	IEP	Neighborhood
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
BP	GO:0023014	signal transduction by protein phosphorylation	IEP	Neighborhood
BP	GO:0031348	negative regulation of defense response	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0031647	regulation of protein stability	IEP	Neighborhood
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0035303	regulation of dephosphorylation	IEP	Neighborhood
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0050821	protein stabilization	IEP	Neighborhood
BP	GO:0050826	response to freezing	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051193	regulation of cofactor metabolic process	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0061687	detoxification of inorganic compound	IEP	Neighborhood
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Neighborhood
BP	GO:0071478	cellular response to radiation	IEP	Neighborhood
BP	GO:0071482	cellular response to light stimulus	IEP	Neighborhood
BP	GO:0071489	cellular response to red or far red light	IEP	Neighborhood
BP	GO:0071585	detoxification of cadmium ion	IEP	Neighborhood
BP	GO:0090693	plant organ senescence	IEP	Neighborhood
BP	GO:0098754	detoxification	IEP	Neighborhood
BP	GO:0104004	cellular response to environmental stimulus	IEP	Neighborhood
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007117	Expansin_CBD	167	244
IPR009009	RlpA-like_DPBB	69	156

External Links

No external refs found!

AT3G55500 (EXPA16, ATHEXP ALPHA...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation