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  5. Zm00001e041085_P001

Zm00001e041085_P001


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 147.0)


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041085_P001
Cluster HCCA: Cluster_536

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00123610 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00053p00162370 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_19215 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g42710.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g52870.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c11_2770V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Pp3c4_25840V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Solyc01g109120.3.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e015781_P001 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 245 280
IPR001680 WD40_repeat 210 239
IPR001680 WD40_repeat 348 380
IPR001680 WD40_repeat 300 335
No external refs found!